Structurity: Evolutional and Developmental Genetics of Biosystem Patterns

REFERENCES:

Nature & Science___(by published date)
I. Nulear transfer:
1. K. H. S. Campbell, J. McWhir, W. A. Ritchie & I. Wilmut, Sheep cloned by nuclear transfer from a cultured cell line, Nature Vol 380:64-66, 7 March 1996.
2. William M. Rideout III, Teruhiko Wakayama, Anton Wutz, Kevin Eggan, Laurie Jackson-Grusby, Jessica Dausman, Ryuzo Yanagimachi & Rudolf Jaenisch, Nulear transfer into mouse zygotes, Nature Genetics, Vol. 24:108-110, Feb. 2000.
3. Anne Mclaren, Cloning: pathways to a pluripotent future, Science vol 288:1775-1780, 9 June 2000.
4. K. J. McCreath, J. Howcroft, K. H. S. Campbell, A. Colman, A. E. Schnieke & A. J. Kind, Production of gene-targeted sheep by nuclear transfer from cultured somatic cells, Nature Vol. 405:1066-1069, 29 July 2000.
5. Akira Onishi, Masaki Iwamoto, Tomiji Akita, Satoshi Mikawa, Kumiko Takeda, Takashi Awata, Hirohumi Hanada, Anthony C. F. Perry, Pig cloning by microinjection of fetal fibroblast nuclei, 18 Aug. 2000, Vol. 289:1188-1190.
6. Irina A. Polejaeva, Shu-Hung Chen, Todd D. Vaught, Raymond L. Page, June Mullins, Suyapa Ball, Yifan Dai, Jeremy Bonne, Shawn Walker, David L. Ayares, Alan Colman & Keith H. S. Campbell, Cloned pigs produced by nulear transfer from adult somatic cells, Nature Vol. 407:86-90, Sept. 2000.
7. Jeff Betthauser, Erik Forsberg, Monica Augenstein, Lynette Childs, Kenneth Eilertsen, Joellyn Enos, Todd Forsythe, Paul Golueke, Gail Jurgella, Richard Koppang, Tiffany Lesmeister, Kelly Mallon, Greg Mell, Pavla Misica, Marvin Pace, Martha Pfister-Genskow, Nikolai Strelchenko, Gary Voelker, Steven Watt, Simon Thompson, and Michael Bishop, Production of cloned pigs from in vitro systems, Nature Biotechnology, Vol. 18:1055-1060, Oct. 2000.
8. Amy A. Kiger, Helen White-Cooper & Margaret T. Fuller, Somatic support cells restrict germline stem cell self-renewal and promote differentiation, Nature, Vol. 407:750-757, 12 Oct. 2000.
9. Ting Xie and Allan C. Spradling, A niche maintaining germ line stem cells in the drosophila ovary, Science Vol. 290:328-330, 13 Oct. 2000.
10. Karolina Piotrowska & Magdalena Zernicka-Goetz, Role for sperm in spatial patterning of the early mouse embryo, Nature, Vol. 409:517-521, 25 Jan. 2001.
11. Tom Misteli, Protein dynamics: implications for nulear architecture and gene expression, Science, 2 Feb. 2001, Vol 291:843-847
II. Molecular Assays:
1. Yasuo Nagai, Masami Miyazaki, Ryoko Aoki, Takeru Zama, Satoshi Inouye, Kenzo Hirose, Masamitsu Lino, and Masatoshi Hagiwara, A fluorescent indicator for visualizing cAMP-induced phosphorylation in vivo, Nature Biotechnology, Vol. 18:313-316, March, 2000.
2. David J. Lockhart & Elizabeth A. Winzeler, Genomics, gene expression and DNA arrays, Nature Vol. 405, 15 June 2000.
3. Akhilesh Pandey & Matthias Mann, Proteomics to study genes and genomes, Nature Vol. 405:837-845, 15 June, 2000.
4. Jun Wie & Gwynneth P. Hemmings, Hot-stop PCR: a simple and general assay for linear quantitation of allele ratios, Nature Genetics Vol. 25:375-377, Aug. 2000.
5. Shu-Mei Dai, Hsiu-Hua Chen, Cheng Chang, Arthur D. Riggs, and Steven D. Flanagan, Ligation-mediated PCR for quantitative in vivo footprinting, Nature Biotechnology, Vol. 18:1108-1111, Oct. 2000.
6. Alexey Terskikh, Arkady Fradkov, Galina Ermakova, Andrey Zaraisky, Patrick Tan, Andrey V. Kajava, Xiaoning Zhao, Sergey Lukyanov, Mikhail Matz, Stuart Kim, Irving Weissman, Paul Siebert, "Fluorescent timer": protein that changes color with time, Science Vol. 290:1585-1588, 24 Nov. 2000.
III. Cell Mutagenesis:
1. Brian P. Zambrowicz, Glenn A. Friedrich, Eric C. Buxton, Stan L. Lilleberg, Christophe Person & Arthur T. Sands, Disruption and sequence identification of 2,000 genes in mouse embryonic stem cells, Nature Vol 392: 608-611, 9 April 1998.
2. Tetsuo Kojima and Toshio Kitamura, A single sequence trap based on a constitutively active cytokine receptor, Nature Biotechnology, Vol 17:487-490, May 1999.
3. Michael V. Wiles, Franz Vauti, Jürgen Otte, Ernst-Martin Füchtbauer, Patricia Ruiz, Annette Füchtbauer, Hans-henning Arnold, Hans Lehrach, Thomas Metz, Harald von Melchner & Wolfgang Wurst, Establishment of a gene-trap sequence tag library to generate mutant mice from embryonic stem cells, Nature Genetics, Vol. 24:13-14, Jan. 2000.
4. Eric S. Lander and Robert A. Weinberg, Genomics: journey to the center of biology, Science Vol 287:1777-1782, 10 March 2000.
5. Karen M, Vasquez, Latha Narayanan, Peter M. Glazer, Specific mutations induced by triplex-forming oligonucleotides in mice, Vol. 290:530-536, Science, 20 Oct. 2000.
6. Claire M. McCallum, Luca Comai, Elizabeth A. Greene, and Steven Henikoff, Targeted screening for induced mutations, Nature Biotechnology, Vol. 18:455-459, April 2000.
7. Yanzheng Xu, Nilesh B. Karalkar, and Eric T. Kool, Nonenzymatic autoligation in direct three-color detection of RNA and DNA point mutations, Nature Biotechnology, Vol 19:148-152, Feb. 2001.
IV. Gene Transfection:
1. Changyu Zheng, Bruce J. Baum, Michael J. Ladarola, and Brian C. O`Connell, Genomic integration and gene expression by a modified adenoviral vector, Nature Biotechnology, Vol. 18:176-180, Feb. 2000.
2. Cecile Esnault, Joel Maestre & Thierry Heidmann, Human LINE retrotransposons generate processed pseudogenes, Nature Genetics, Vol 24,: 363-367, April 2000.
3. Benoit Cousineau, Stacey Lawrence, Dorie Smith & Marlene Belfort, Retrotransposition of a bacteria group II intron, Nature Vol. 404:1018-1022, 27 April 2000.
4. Stephen R. Yant, Leonard Meuse, Winnie Chiu, Zoltan Ivics, Zsuzsannal Izsvak & Mark A. Kay, Somatic integration and long-term transgene expression in normal and haemophilic mice using a DNA transposon system, Nature Genetics, Vol. 25:35-41, May 2000.
5. Carolyn I. Rodriguez, Frank Buchholz, Jenna Galloway, Reynaldo Sequerra, Jocelyn Kasper, Ramses Ayala, A. Francis Stewart & Susan M. Dymecki, High-efficiency deleter mice show that FLPe is an alternative to Cre-loxP, Nature Genetics, vol. 25:139-140, June 2000.
6. Yikang S. Rong and Kent G. Golic, Gene targeting by homologous recombination in drosophila, Science Vol 288:2013-2018, 16 June 2000.
7. Huatao Guo, Michael Karberg, Meredith Long, J. P. Jones III, Bruce Sullenger, Alan M. Lambowitz, Group II introns designed to insert into therapeutically relevant DNA target sites in human cells, 21 July 2000, Vol 289:452-457, Science.
8. Jason R. Kennerdell and Richard W. Carthew, Heritable gene silencing in drosophila using double-stranded RNA, Nature Biotechnology, Vol 18:896-898, Aug. 2000.
9. Nobuaki Kikyo, Paul A. Wade, Dmitry Guschin, Hui Ge, Alan P. Wolffe, Active remodeling of somatic nuclei in egg cytoplasm by the nucleosomal ATPase ISWI, 29 Sept. 2000, Vol. 289:2360-2362, Science.
10. Alan Dove, Milking the genome for profit, Nature Biotechnology, Vol. 18:1045-1048, Oct. 2000.
11. Yoshimi Kuroiwa, Kazuma Tomizuka, Tokuyuki Shinohara, Yasuhiro Kazuki, Hitoshi Yoshida, Atsuko Ohguma, Terumi Yamamoto, Sonoko Tanaka, Mitsuo Oshimura, and Isao Ishida, Manipulation of human minichromosomes to carry greater than megabase-sized chromosome inserts, Nature Biotechnology, Vol. 18:1086-1090, Oct. 2000.
12. Dirk Esser, Hiroshi Amanuma, Atsushi Yoshiki, Moriaki Kusakable, Rainer Rudolph, and Gerald Böhm, A hyperthermostable bacterial histone-like protein as an efficient mediator for transfection of eukaryotic cells, Nature Biotechnology, Vol. 18:1211-1213, Nov. 2000.
13. Anthony T. Cheung, Bama Dayanandan, Jamie T. Lewis, Gregory S. Korbutt, Ray V. Rajotte, Michael Bryer-Ash, Michael O. Boylan, M. Michael Wolfe, Timothy J. Kieffer, Glucose-dependent insulin release from genetically engineered K cells, Science, Vol. 290:1959-1962, 8 Dec. 2000.
14. A. W. S. Chan, K. Y. Chong, C. Martinovich, C. Simerly, G. Schatten, Transgenic monkeys produced by retroviral gene transfer into mature oocytes, Science, Vol. 291:309-312, 12 Jan. 2001.
15. Eileen E. M. Furlong, David Profitt, and Matthew P. Scott, Automated sorting of live transgenic embryos, Nature Biotechnology, Vol 19: 153-156, Feb. 2001.
V. Stem cells:
1. Diana L. Clarke, Clas B. Johannes Wilbertz, Biborka Veress, Erik Nilsson, Helena Karlström, Urban Lendahl, Jonas Frisen, Generalized potential of adult neural stem cells, 2 June 2000, Vol. 288:1660-1663, Science.
2. Sang-Hun Lee, Nadya Lumelsky, Lorenz Studer, Jonathan M. Auerbach, and Ron D. McKay, Efficient generation of midbrain and hindbrain neurons from mouse embryonic stem cells, Nature Biotechnology Vol 18:675-679, June 2000.
3. Robert L. Phillips, Robin E. Ernst, Brian Brunk, Natalia Ivanova, Mark A. Mahan, Julia K. Deanehan, Kateri A. Moore, G. Christian Overton, Ihor R. Lemischka, The genetic program of hematopoietic stem cells, Science Vol. 288:1635-1640, 2 June 2000.
4. Paul Nurse, The incredible life and times of biological cells, Science vol 289:1711-1716, 8 Sept. 2000.
5. Dean G. Tang, Yasuhito M. Tokumoto, James A. Apperly, Alison C. Lloyd, Martin C. Raff, Lack of replicative senescence in cultured rat oligodendrocyte precursor cells, 2 Feb. 2001, Vol 291:868-871.
VI. Cell Signalling:
1. Michael W. Schwartz, Stephen C. Woods, Daniel Porte Jr, Randy J. Seeley & Denis G. Baskin, Central nervous system control of food intake, Nature Vol 404:661-671, 6 April 2000.
2. Timothy J. Boucher, Kenji Okuse, David L. H. Bennett, John B. Munson, John N. Wood, Stephen B. McMahon, Potent analgesic effects of GDNF in neuropathic pain states, Science 6 Oct. 2000, Vol 290:124-127.
3. Mengia-S. Rioult-Pedotti, Daniel Friedman, John P. Donoghue, Learning-induced LTP in neocortex, Science Vol 290:533-575, Oct. 2000.
4. Eric R. Kandel and Larry R. Squire, Neuroscience: breaking down scientific barriers to the study of brain and mind, Science Vol 290:1113-1120, 10 Nov. 2000.
5. Laura M. Bohn, Raul R. Gainetdinov, Fang-Tsyr Lin, Robert J. Lefkowitz & Marc G. Caron, m-Opioid receptor desensitization by b-arrestin-2 determines morphine tolerance but not dependence, Nature Vol 408:720-723, 7 Dec. 2000.
6. Erik M. Ullian, Stephaie K. Sapperstein, Karen S. Christopherson, Ben A. Barres, Control of synapse number by glia, Science Vol 291:657-661, 26 Jan. 2001.
7. Yuji Naya, Masatoshi Yoshida, Yasushi Miyashita, Backward spreading of memory-retrieval signal in the primate temporal cortex, Science VOL 291:661-664, Jan. 2001.
8. Pascal Meier, Andrew Finch and Gerard Evan, Apoptosis in development, Nature Vol 407:796-801, 12 Oct. 2000.
9. Michael O. Hengartner, The biochemistry of apoptosis. Nature. 2000 Oct 12;407(6805):770-6. Review.
10. Junying Yuan and Bruce A. Yankner, Apoptosis in the nervous system, Nature Vol 407:802-809, 12 Oct. 2000.
11. Jeffrey V. Ravetch and Lewis L. Lanier, Immune inhibitory receptors, 6 Oct. 2000, Science, Vol 290:84-88.
12. Peter Duchek and Pernille Rorth, Guidance of cell migration by EGF receptor signaling during Drosophila oogenesis, Science Vol 291:131-133, 5 Jan. 2001.
13. Stephen C. Noctor, Alexander C. Flint, Tamily A. Weissman, Ryan S. Dammerman, & Arnold R. Kriegstein, Neurons derived from radial glial cells establish radial units in neocortex, Nature Vol 409:714-720, 8 Feb. 2001.

Structurity Bulletin